This is a list of Mombasa County Government ministers ( CECs) as of 2021. Mombasa County is headed by Governor Ali Hassan Joho.
Mombasa county government structure consists of 7 County Executive Committee members as listed below.
Mombasa County Government Ministers 2021
| Ministry | Minister (CEC) | |
| 1 | Trade, Tourism & Investiment | Fawz Rashid |
| 2 | Agriculture, Fisheries, Livestock & Cooperatives | Lewa Tendai Mtana |
| 3 | Education and Information Communication Technology | Seth Odongo |
| 4 | Finance & Economic Planning | Maryam Mbaruk |
| 5 | Environment, waste management and energy | Godfrey Nato |
| 6 | Health Services | Godfrey Nato – acting |
| 7 | Transport, Infrastructure and Public Works | Taufiq Mohamed Balala |
| 8 | Water, Sanitation and Natural Resources | Maryam Abdillahi Mbaruk – acting |
| 9 | Youth, Gender, Sports & Cultural Affairs | – |
| 10 | Lands, Planning & Housing | – |
| 11 | Devolution & Public Service Administration | – |
